7. van den Top, GG; Reynolds, JD; Prins, HHT; Mattsson, J; Green, DJ; Ydenberg, RC. (2018) From salmon to salmonberry: The effects of salmon-derived nutrients on the stomatal density of leaves of the nitriphilic shrub Rubus spectabilis.Funct. Ecol. 32 From salmon to salmonberry: The effects of salmon-derived nutrients on the stomatal density of leaves of the nitriphilic shrub Rubus spectabilis
Great Bear Rainforest; nutrient subsidy; Rubus spectabilis; salmonberry; salmon-derived nutrients; stomata; stomatal density
Nutrients derived from the carcasses of Pacific salmon have been shown to have wide-ranging effects on riparian systems. These include changes in community species composition and an increase in leaf nitrogen concentration, with the latter effect pronounced in the nitriphilic shrub Rubus spectabilis (salmonberry). Experimental work with other species has shown that leaf stomatal density increases in response to nitrogen fertilization. We predicted that the stomatal density of salmonberry leaves would vary directly with the density of spawning salmon in salmonberry leaves collected from 16 streams in the vicinity of Bella Bella, on British Columbia's central coast. We estimated the stomatal density along each stream, and quantified stream characteristics, including the number of spawning salmon (Oncorhynchus spp.), canopy cover, stem density and soil moisture. We found that salmon have both direct and indirect effects on stomatal density, the latter mediated by canopy cover and stem density. Salmonberry stomatal density increased by 1.12 stomata per mm(2) (similar to 0.5%) for every kg of salmon per metre of stream. Over the range of salmon densities observed (1.8-49.0 kg per metre of stream), stomatal density increased by almost 45 mm(-2), or more than 20%. These data confirm that the stomatal density in salmonberry responds positively to the opportunity for greater productivity provided by salmon carcasses. The data provide insight into the physiological and morphological processes supporting nitrogen uptake, which in turn influences plant community composition. A is available for this article. DOI
6. Gesell, A; Blaukopf, M; Madilao, L; Yuen, MMS; Withers, SG; Mattsson, J; Russell, JH; Bohlmann, J. (2015) The Gymnosperm Cytochrome P450 CYP750B1 Catalyzes Stereospecific Monoterpene Hydroxylation of (+)-Sabinene in Thujone Biosynthesis in Western Redcedar.Plant Physiology 168: 94-U776 The Gymnosperm Cytochrome P450 CYP750B1 Catalyzes Stereospecific Monoterpene Hydroxylation of (+)-Sabinene in Thujone Biosynthesis in Western Redcedar
Western redcedar (WRC; Thuja plicata) produces high amounts of oxygenated thujone monoterpenoids associated with resistance against herbivore feeding, particularly ungulate browsing. Thujones and other monoterpenoids accumulate in glandular structures in the foliage of WRC. Thujones are produced from (+)-sabinene by sabinol and sabinone. Using metabolite analysis, enzyme assays with WRC tissue extracts, cloning, and functional characterization of cytochrome P450 monooxygenases, we established that transsabin- 3-ol but not cis-sabin-3-ol is the intermediate in thujone biosynthesis in WRC. Based on transcriptome analysis, full-length complementary DNA cloning, and characterization of expressed P450 proteins, we identified CYP750B1 and CYP76AA25 as the enzymes that catalyze the hydroxylation of (+)-sabinene to trans-sabin-3-ol. Gene-specific transcript analysis in contrasting WRC genotypes producing high and low amounts of monoterpenoids, including a glandless low-terpenoid clone, as well as assays for substrate specificity supported a biological role of CYP750B1 in alpha- and beta-thujone biosynthesis. This P450 belongs to the apparently gymnosperm-specific CYP750 family and is, to our knowledge, the first member of this family to be functionally characterized. In contrast, CYP76AA25 has a broader substrate spectrum, also converting the sesquiterpene farnesene and the herbicide isoproturon, and its transcript profiles are not well correlated with thujone accumulation.Website DOI
5. Aloni, R; Foster, A; Mattsson, J. (2013) TRANSFUSION TRACHEIDS IN THE CONIFER LEAVES OF THUJA PLICATA (CUPRESSACEAE) ARE DERIVED FROM PARENCHYMA AND THEIR DIFFERENTIATION IS INDUCED BY AUXIN.American Journal of Botany 100: 1949-1956 TRANSFUSION TRACHEIDS IN THE CONIFER LEAVES OF THUJA PLICATA (CUPRESSACEAE) ARE DERIVED FROM PARENCHYMA AND THEIR DIFFERENTIATION IS INDUCED BY AUXIN
VASCULAR DIFFERENTIATION; TRANSPORT INHIBITORS; LEAF VEIN; TISSUE; GIBBERELLIN; ARABIDOPSIS; FOLIAR; PHLOEM; PINUS
Premise of the study: Conifer leaves are characterized by the differentiation of transfusion tracheids either adjacent to the vascular bundle or away from bundles. Toward uncovering the mechanism regulating this differentiation, we tested the hypotheses that transfusion tracheids differentiate from parenchyma rather than from procambium and that auxin acts as an inducer of this process. Methods: Transfusion tracheids were studied at different developmental stages in both dissected and cleared juvenile and mature leaves. Auxin accumulation was induced by application of either auxin to juvenile leaves or of auxin transport inhibitors in lanolin to stems. Key results: Transfusion tracheids originate from parenchyma cells during late stages of leaf development, after the activity of the procambium has ceased. Transfusion tracheids differentiate also in the leaf tip, a region in which there are no procambial cells. Application of either auxin or auxin transport inhibitors resulted in a significant increase in transfusion tracheids in leaves. Disruption of the leaf vascular bundle combined with auxin application resulted in direct differentiation of transfusion tracheids from parenchyma cells; the regeneration of a vascular bundle around the disruption was polar and supports both hypotheses. Conclusions: The results provide experimental support for a parenchymatic origin of the transfusion tracheids in a conifer leaf and for auxin acting as an inducer of these cells. Our results suggest a new model in which auxin production in the leaf apex continues after primary tracheids and parenchyma cells have differentiated, and this late auxin flow induces transfusion tracheids from parenchyma cells. DOI
4. Baylis, T; Cierlik, I; Sundberg, E; Mattsson, J. (2013) SHORT INTERNODES/STYLISH genes, regulators of auxin biosynthesis, are involved in leaf vein development in Arabidopsis thaliana.New Phytologist 197: 737-750 SHORT INTERNODES/STYLISH genes, regulators of auxin biosynthesis, are involved in leaf vein development in Arabidopsis thaliana
Arabidopsis; auxin; cotyledon; leaf; SHORT INTERNODES; STYLISH; vein
Leaves depend on highly developed venation systems to collect fixed carbon for transport and to distribute water. We hypothesized that local regulation of auxin biosynthesis plays a role in vein development. To this effect, we assessed the role of the SHORT INTERNODES/STYLISH (SHI/STY) gene family, zinc-finger transcription factors linked to regulation of auxin biosynthesis, in Arabidopsis thaliana leaf vein development. Gene functions were assessed by a combination of high-resolution spatio-temporal expression analysis of promoter-marker lines and phenotypic analysis of plants homozygous for single and multiple mutant combinations. The SHI/STY genes showed expression patterns with variations on a common theme of activity in incipient and developing cotyledon and leaf primordia, narrowing to apices and hydathode regions. Mutant analysis of single to quintuple mutant combinations revealed dose-dependent defects in vein patterning affecting multiple vein traits, most notably in cotyledons. Here we demonstrate that local regulation of auxin biosynthesis is an important aspect of leaf vein development. Our findings also support a model in which auxin synthesized at the periphery of primordia affects vein development. DOI
3. Foster, AJ; Hall, DE; Mortimer, L; Abercromby, S; Gries, R; Gries, G; Bohlmann, J; Russell, J; Mattsson, J. (2013) Identification of Genes in Thuja plicata Foliar Terpenoid Defenses.Plant Physiology 161: 1993-2004 Identification of Genes in Thuja plicata Foliar Terpenoid Defenses
WHITE-PINE WEEVIL; HIGH-QUALITY RNA; CONIFER DEFENSE; SITKA SPRUCE; WESTERN REDCEDAR; FUNCTIONAL-CHARACTERIZATION; CHAMAECYPARIS-NOOTKATENSIS; BIOSYNTHESIS; METABOLISM; DEER cedar
Thuja plicata (western redcedar) is a long-lived conifer species whose foliage is rarely affected by disease or insect pests, but can be severely damaged by ungulate browsing. Deterrence to browsing correlates with high foliar levels of terpenoids, in particular the monoterpenoid a-thujone. Here, we set out to identify genes whose products may be involved in the production of a-thujone and other terpenoids in this species. First, we generated a foliar transcriptome database from which to draw candidate genes. Second, we mapped the storage of thujones and other terpenoids to foliar glands. Third, we used global expression profiling to identify more than 600 genes that are expressed at high levels in foliage with glands, but can either not be detected or are expressed at low levels in a natural variant lacking foliar glands. Fourth, we used in situ RNA hybridization to map the expression of a putative monoterpene synthase to the epithelium of glands and used enzyme assays with recombinant protein of the same gene to show that it produces sabinene, the monoterpene precursor of a-thujone. Finally, we identified candidate genes with predicted enzymatic functions for the conversion of sabinene to a-thujone. Taken together, this approach generated both general resources and detailed functional characterization in the identification of genes of foliar terpenoid biosynthesis in T. plicata.Website DOI
2. Dolgosheina, EV; Morin, RD; Aksay, G; Sahinalp, SC; Magrini, V; Mardis, ER; Mattsson, J; Unrau, PJ. (2008) Conifers have a unique small RNA silencing signature.RNA-Publ. RNA Soc. 14: 1508-1515 Conifers have a unique small RNA silencing signature
RNA silencing; Dicer (DCL); small RNA processing; plant evolution; gymnosperms
Plants produce small RNAs to negatively regulate genes, viral nucleic acids, and repetitive elements at either the transcriptional or post-transcriptional level in a process that is referred to as RNA silencing. While RNA silencing has been extensively studied across the different phyla of the animal kingdom (e. g., mouse, fly, worm), similar studies in the plant kingdom have focused primarily on angiosperms, thus limiting evolutionary studies of RNA silencing in plants. Here we report on an unexpected phylogenetic difference in the size distribution of small RNAs among the vascular plants. By extracting total RNA from freshly growing shoot tissue, we conducted a survey of small RNAs in 24 vascular plant species. We find that conifers, which radiated from the other seed-bearing plants; 260 million years ago, fail to produce significant amounts of 24-nucleotide (nt) RNAs that are known to guide DNA methylation and heterochromatin formation in angiosperms. Instead, they synthesize a diverse population of small RNAs that are exactly 21-nt long. This finding was confirmed by high-throughput sequencing of the small RNA sequences from a conifer, Pinus contorta. A conifer EST search revealed the presence of a novel Dicer-like (DCL) family, which may be responsible for the observed change in small RNA expression. No evidence for DCL3, an enzyme that matures 24-nt RNAs in angiosperms, was found. We hypothesize that the diverse class of 21-nt RNAs found in conifers may help to maintain organization of their unusually large genomes. DOI PubMed
